EGAF00005318543 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318543
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3364080
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	8313	0.2471106513519298	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	6974	0.20730779291812323	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	5287	0.15716035290480607	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4504	0.13388504435090723	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	3457	0.10276212218496587	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	2940	46.91398	9
TGGCGCG	3120	43.874714	15
CCGAACT	505	38.907417	67
GTACGCA	365	38.900505	65
CTACTCG	3595	38.038315	37
CGCGGTG	3670	37.9572	10
CGGCATA	230	37.562424	1
TACTCGG	3670	37.17981	38
AGTACGC	410	37.179672	64
GTAGTCC	3780	36.71748	27
TAGTCCC	3840	35.98332	28
GGGGTAG	1650	35.60462	1
CGGTATG	205	35.40029	1
GCCGGTT	565	35.307365	3
CGGGTAG	470	35.29269	1
ACTCGGG	4055	35.042942	39
AGGATCG	3895	34.87803	59
TGTAGTC	3955	34.815826	26
GATCGCT	3940	34.53826	61
CGTGCCT	3980	34.438362	20