EGAF00005318545 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318545
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3371051
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	8434	0.25018903600093856	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	7100	0.21061680763655014	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	5416	0.1606620605858529	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4533	0.13446844915725095	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	3590	0.10649497738242465	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	2960	45.07251	9
TGGCGCG	3220	41.86026	15
CGGCATA	300	40.37845	1
CGGGTAG	455	38.033073	1
TACTCGG	3570	37.360744	38
CGGCAAT	335	37.19294	1
CGCGGTG	3625	36.993748	10
CTACTCG	3595	36.986538	37
GGGGACT	3385	36.91062	1
GTAGTCC	3800	35.984966	27
CGGTATC	185	35.54551	1
TCTGGTC	2570	35.45557	10
CGGCATT	615	35.454247	1
CGGCAAC	600	35.18693	1
TAGTCCC	3955	34.683746	28
TGTAGTC	3975	34.390453	26
ACTCGGG	4030	34.234684	39
ACTCTTC	2710	33.880703	5
GGGGTAG	1470	33.668327	1
GTACGCA	425	33.403576	65