EGAF00005318547 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318547
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3413868
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	8262	0.24201287220244017	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	7253	0.2124569549847856	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	5498	0.16104899193524763	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4639	0.13588691771328007	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	3683	0.10788349168743488	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	3125	46.417435	9
TGGCGCG	3475	42.039047	15
GCCGGTT	530	38.91409	3
CCGAACT	555	38.64327	67
CGCGGTG	3885	37.602493	10
TACTCGG	3965	37.150246	38
GGGGACT	3445	37.14804	1
CTACTCG	3955	37.04981	37
GGGGTAT	1305	35.515484	1
GTAGTCC	4205	35.379917	27
TCTGGTC	2775	35.178234	10
ACTCTTC	2860	35.094727	5
CGGCATT	595	34.87849	1
ACTCGGG	4360	34.760845	39
CGGTTCA	615	34.653065	5
GCGGTAT	190	34.587837	1
TAGTCCC	4350	34.375504	28
GGACTCT	3210	34.052856	3
AGGATCG	4150	34.03127	59
GATCGCT	4185	33.974293	61