EGAF00005318553 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318553
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3795076
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	9310	0.24531788032703428	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	6040	0.1591535979780115	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	5958	0.15699290343592592	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	5779	0.1522762653501537	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	3817	0.10057769594074006	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	1290	57.21762	4
TACGGCC	1290	56.67588	7
TCTACGG	1320	55.654694	5
CTACGGC	1390	52.60125	6
GCGCGGT	4710	47.669704	9
TGGCGCG	5000	45.112755	15
CCGAACT	785	43.066685	67
ACGGCCA	1725	42.984615	8
GAACGCG	1715	42.257385	24
ATCTCGT	1740	41.914757	35
CGCGGTG	5455	41.731014	10
CGGCCAT	1835	40.78552	9
GCCATAC	1800	40.616108	11
CCCGATC	1785	40.443317	31
GCCCGAT	1805	39.987797	30
CTGAACG	1830	39.975033	22
TGAACGC	1825	39.707745	23
TCTCGGA	1850	39.2997	46
CGCCCGA	1835	38.951206	29
GCCGGTT	890	38.93587	3