FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005318560

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005318560
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3129039
Sequences flagged as poor quality0
Sequence length35-76
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG143170.4575526223866177No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN107230.34269307605306293No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG47010.15023782062160299No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG37260.11907809394513778No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)