EGAF00005318571 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318571
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3460851
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	21657	0.6257709447762992	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	11284	0.3260469751514873	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	9629	0.278226366867571	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	5958	0.17215418982209868	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	5700	0.16469937596273287	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	5234	0.1512344796120954	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	4587	0.13253965570895712	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	4536	0.1310660297135011	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4082	0.11794786889120625	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	4190	63.064766	4
TCTACGG	4225	62.54234	5
TACGGCC	4235	62.16204	7
CTACGGC	4285	61.589977	6
ACGGCCA	4600	57.453754	8
CGGCCAT	4630	56.487656	9
GCCATAC	4680	56.10446	11
GGGTCTA	3555	55.578785	2
CCTGGTT	7170	53.758812	70
GGTCTAC	4185	52.71256	3
CCATACC	5015	52.35671	12
GCGCGGT	5375	52.11096	9
CATACCA	5050	52.061897	13
GGCCATA	5140	51.150303	10
TGGCGCG	5570	50.894047	15
TACCACC	5245	50.116898	15
ATACCAC	5350	49.264595	14
GCGTCTA	865	48.861835	2
CTGAACG	5380	48.859768	22
GAACGCG	5385	48.706367	24