EGAF00005318577 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318577
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3670819
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	9659	0.26312929076590263	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	8011	0.21823467732950055	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	7801	0.21251388314160957	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	7183	0.19567840310295878	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	6534	0.17799842487466694	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	4227	0.11515141443912108	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	3700	0.1007949452152231	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	1805	59.263996	4
TCTACGG	1815	58.747963	5
TACGGCC	1895	56.083263	7
CTACGGC	1950	54.6808	6
GCGCGGT	4460	51.434822	9
ACGGCCA	2145	50.025745	8
GCCATAC	2240	48.211197	11
TGGCGCG	4840	47.467606	15
CGGCCAT	2270	47.271023	9
CCGAACT	805	45.20301	67
CGGGTAG	495	44.72743	1
CATACCA	2435	44.632828	13
CCATACC	2445	44.16895	12
GCGTCTA	505	43.60048	2
CGCGGTG	5395	42.83947	10
GAACGCG	2475	42.232986	24
GGGTCTA	2000	41.800255	2
GCCGGTT	875	41.66828	3
CCCGATC	2540	41.55072	31
ATCTCGT	2545	41.547832	35