EGAF00005318581 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318581
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3656728
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	9579	0.2619554968266713	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	7966	0.21784502429494346	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	7850	0.21467278944455262	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	7048	0.19274061401340215	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	6125	0.16749946947106814	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	4236	0.11584126574358279	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	1570	60.483765	4
TACGGCC	1605	58.956905	7
TCTACGG	1620	58.62421	5
CTACGGC	1700	56.06784	6
GCGCGGT	4830	50.9373	9
TGGCGCG	5035	48.45069	15
ACGGCCA	2015	47.643772	8
CCGAACT	825	47.52458	67
CGGCCAT	2085	45.879192	9
GCCATAC	2085	45.549126	11
CGCGGTG	5720	43.37268	10
CTACTCG	5740	43.074207	37
CGTGCCT	5740	42.98135	20
TACTCGG	5775	42.827374	38
CCATACC	2280	41.802673	12
GTAGTCC	6075	41.22184	27
GGGTCTA	1795	41.02402	2
CATACCA	2360	40.677227	13
TAGTCCC	6180	40.66067	28
GAACGCG	2265	40.373375	24