EGAF00005318582 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318582
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3655957
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	18205	0.4979544343656121	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	8810	0.24097657603740966	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	8234	0.22522146732032133	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	8016	0.21925859631281222	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	6978	0.19086657747889268	No Hit
GGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCT	6279	0.17174709658784282	No Hit
GTGGCTTAGGAGCTTGAAGTTGACCGGGTCCACCCGAAGCTTGTGCGCGT	5279	0.14439447728734228	No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC	5048	0.13807602222892665	No Hit
GTGCGCGTGCAGGTCGCTCAGGGCGGACAGCGCGTTGGGCATGTCGTCCA	4877	0.13339872432854108	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	4486	0.12270385018204537	No Hit
GGGGGTACGGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGG	4336	0.11860095728697029	No Hit
GCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCTT	4144	0.11334925438127419	No Hit
TGTCCAGGGAGGCGTGCACCGCAGGGGTGAACTCGGCGGGGAGGTGGGCG	3839	0.10500670549462152	No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA	3793	0.1037484850067985	No Hit
GACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGAAGTG	3682	0.10071234426444294	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGGCCGT	1980	41.545143	70
GTTCCGT	380	41.072464	1
CGCGGCA	5260	38.88795	32
GCGGCAC	5495	37.166367	33
CGGCACC	5600	36.10444	34
TCGCCGG	5395	35.79069	48
CCGTCGC	5480	35.23686	45
CCCGTCG	5490	35.160072	44
GCACCCC	5960	34.229626	36
CACCCCC	6205	32.945328	37
ATGGCCG	1980	32.92295	69
CCCCCGA	6300	32.542698	19
ACCCGCG	6445	31.897404	25
GGCACCC	6535	31.102673	35
CCCCGAC	6635	30.801315	20
TTCCGTT	610	30.606192	2
CCCCCGT	6480	29.607386	42
GTGCCGT	575	29.5563	1
GTAGCGT	410	29.498339	10
TACGGCC	450	29.179943	15