EGAF00005318584 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318584
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3633937
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	18003	0.4954131015479905	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	8519	0.23442894029258077	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	8239	0.22672379845880652	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	8049	0.22149530935731687	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	7035	0.19359168857357736	No Hit
GGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCT	6269	0.17251262198546644	No Hit
GTGGCTTAGGAGCTTGAAGTTGACCGGGTCCACCCGAAGCTTGTGCGCGT	5255	0.14460900120172696	No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC	5101	0.14037117319315112	No Hit
GTGCGCGTGCAGGTCGCTCAGGGCGGACAGCGCGTTGGGCATGTCGTCCA	4955	0.1363534920941117	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	4376	0.12042035951641428	No Hit
GGGGGTACGGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGG	4223	0.11621004987153052	No Hit
GCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCTT	4211	0.11587982950722592	No Hit
TGTCCAGGGAGGCGTGCACCGCAGGGGTGAACTCGGCGGGGAGGTGGGCG	3738	0.10286364348088589	No Hit
GCCGGTGCAAGGAGGGGAGGAGGGCCCGTTGGGAGGCCCAGCGGGCAGGAGGAACGGCTACCGAGGCTCCAGCTT	3654	0.10055210093075362	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGGCCGT	1855	45.516098	70
CGCGGCA	5260	40.133663	32
GCGGCAC	5455	38.7738	33
CGGCACC	5575	37.451477	34
TCGCCGG	5365	36.576683	48
CCGTCGC	5410	36.42019	45
AGGACCG	530	36.03358	70
CCCGTCG	5510	35.93927	44
GCACCCC	6250	33.590836	36
CCCCCGA	6310	33.425755	19
ACCCGCG	6360	33.14103	25
GGCACCC	6555	32.07106	35
CACCCCC	6570	31.860575	37
GTGCCGT	565	31.459888	1
ATGGCCG	2105	31.293037	69
CGTACGT	235	30.898129	19
CCCCGAC	6820	30.72973	20
CCCCCGT	6465	30.552391	42
CGCCCTA	1105	29.923111	61
GTTCCGT	405	29.258991	1