EGAF00005318585 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318585
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3633937
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	18912	0.5204272941440647	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	17351	0.4774711284207734	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	15401	0.4238103192212743	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	13777	0.3791204965853839	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	9011	0.24796797522906974	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	5046	0.13885766319008833	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4897	0.13475742699997276	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	3722	0.10242334966181307	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	3825	63.68346	4
TACGGCC	3860	62.834026	7
TCTACGG	3865	62.756195	5
CTACGGC	3980	60.85607	6
ACGGCCA	4280	56.908672	8
CGGCCAT	4345	56.136845	9
GCCATAC	4330	56.012157	11
GCGCGGT	7355	54.53592	9
GGGTCTA	3350	54.4733	2
GCCGGTT	1175	54.106438	3
GCGTCTA	765	53.762585	2
CCGAACT	1225	53.303814	67
CATACCA	4600	53.024185	13
CCATACC	4635	52.548523	12
CCTGGTT	6595	52.006596	70
GGCCATA	4695	51.878407	10
CGTCTAC	905	51.541157	3
TGGCGCG	7910	50.752422	15
CGCGGTG	7965	50.489407	10
TACCACC	4840	50.466267	15