EGAF00005318587 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318587
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3644525
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	18981	0.5208086101755373	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	17230	0.47276394043119474	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	15371	0.4217559215535632	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	13855	0.38015928001591426	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	9277	0.25454620286594276	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	5233	0.14358524087501115	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4863	0.13343302625170633	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	3710	62.9493	5
GTCTACG	3735	62.620445	4
TACGGCC	3745	62.453236	7
CTACGGC	3895	60.136803	6
ACGGCCA	4060	57.777912	8
CGGCCAT	4145	56.426384	9
GCCATAC	4210	55.801373	11
GGGTCTA	3315	54.507236	2
CCGAACT	1440	54.263435	67
GCGTCTA	740	53.69108	2
GCCGGTT	1430	53.634834	3
GCGCGGT	7805	53.24892	9
CCATACC	4415	52.81912	12
CGGTTCA	1465	52.58784	5
CATACCA	4475	52.11093	13
CGCGGTG	8175	50.712097	10
TACCACC	4630	50.441013	15
GGCCATA	4670	50.082947	10
CCTGGTT	6710	49.876705	70
TGGCGCG	8370	49.86084	15