FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005318590

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005318590
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3105322
Sequences flagged as poor quality0
Sequence length35-76
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG166830.5372389723191348No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN104580.33677666921497995No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG68190.21959075419553917No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA44830.14436506101460653No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG32860.1058183338153016No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC32010.10308109754801596No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)