EGAF00005318599 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318599
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3465561
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	20967	0.6050102710643385	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	11968	0.34534091305852066	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	9825	0.2835038829211201	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	8480	0.244693427701893	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	6142	0.1772296029416305	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	5605	0.16173427621098	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	5379	0.1552129655198682	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4011	0.11573883708871377	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	3978	0.11478661030638329	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	4050	62.8391	5
TACGGCC	4070	62.361984	7
GTCTACG	4140	61.473927	4
CTACGGC	4175	61.12267	6
ACGGCCA	4365	58.305164	8
GCCATAC	4460	56.590126	11
CGGCCAT	4510	56.277885	9
CGGTCTA	570	55.58207	2
GCGTCTA	905	55.174854	2
GGGTCTA	3260	54.824097	2
CCATACC	4635	54.31198	12
CATACCA	4710	53.44714	13
CCGAACT	1000	53.41583	67
CCTGGTT	6650	53.035263	70
GGCCATA	4800	52.80602	10
GCGCGGT	5875	52.464077	9
GCCGGTT	1025	51.4031	3
TACCACC	5010	50.795143	15
CGTCTAC	1130	50.283703	3
CTGAACG	5120	49.363045	22