EGAF00005318606 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318606
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5051323
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	21861	0.43277770991876785	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	10771	0.2132312663434906	No Hit
GACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGAAGTG	6576	0.13018371622642225	No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC	6205	0.12283910571547296	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	5990	0.11858279504201176	No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA	5334	0.10559609828949762	No Hit
TGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCAC	5066	0.10029055754304367	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCGGCA	7440	35.645588	32
GCGGCAC	7830	33.878548	33
CGGCACC	8365	31.886784	34
TCGCCGG	7410	30.435642	48
AGGACCG	1175	30.089554	70
CCCGTCG	7655	29.640966	44
CCGTCGC	7650	29.441692	45
CACCCCC	9175	29.248796	37
CGTACGT	370	28.974308	19
CCCCCGA	9210	28.912401	19
GCACCCC	9365	28.906254	36
ACCCGCG	9820	27.073347	25
GTTATCG	365	26.519379	6
TCGTTTG	2535	26.321838	17
AGTCCGC	10165	26.288773	7
TCGCCGT	570	26.184351	1
AGGAGGG	12120	26.089537	70
GTTCCGT	480	26.032116	1
TAGTCCG	465	26.020357	6
GGCACCC	10385	25.993309	35