EGAF00005318608 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318608
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5036195
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	21797	0.4328069107729149	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	10608	0.2106352117024857	No Hit
GACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGAAGTG	6396	0.12700064235002814	No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC	6117	0.12146074566215168	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	5722	0.11361752275279255	No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA	5164	0.10253772937703962	No Hit
TGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCAC	5116	0.10158462887159851	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCGGCA	7595	34.92133	32
GCGGCAC	8100	32.666992	33
CGGCACC	8475	31.27151	34
TAGTCCG	555	31.145689	6
AGGACCG	1075	31.05637	70
TCGCCGG	7545	30.864035	48
GTTCCGT	430	30.83644	1
CCGTCGC	7650	30.62529	45
CCCGTCG	7965	29.749182	44
CCCCCGA	9145	29.232916	19
GCACCCC	9420	28.520283	36
CACCCCC	9430	28.46175	37
ACCCGCG	9675	27.515078	25
CGTACGT	355	27.277594	19
GTGCCGT	800	27.042747	1
GTACGGC	1085	26.766796	14
AGGAGGG	12260	26.702948	70
CCCCGAC	10035	26.643703	20
GTTCGCA	780	26.595213	16
AGTCCGC	10215	26.499907	7