EGAF00005318610 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318610
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5049099
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	21854	0.43282969892252066	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	10696	0.2118397757698948	No Hit
GACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGAAGTG	6502	0.1287754508279596	No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC	6184	0.12247729743465122	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	5992	0.11867463878208766	No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA	5239	0.10376108687906496	No Hit
TGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCAC	5149	0.1019785906356758	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCGGCA	7555	35.93084	32
GCGGCAC	7970	34.11223	33
CGGCACC	8560	31.852192	34
CGTACGT	370	30.84304	19
TCGCCGG	7620	30.190529	48
CCCGTCG	7645	30.136913	44
CCGTCGC	7770	29.388319	45
CACCCCC	9395	29.30274	37
CGTAGCG	815	29.265186	9
CCCCCGA	9430	29.044134	19
GCACCCC	9465	29.00459	36
TAGTCCG	580	28.011072	6
GTAGCGT	855	27.896057	10
ACCCGCG	9870	27.632774	25
AGGAGGG	12170	27.013046	70
CCCCGAC	10165	26.947517	20
CGATCTA	415	26.866438	47
GTTCCGT	530	26.843885	1
GGCACCC	10205	26.828007	35
TAGCGTC	880	26.71075	11