EGAF00005318611 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318611
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5049099
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	13873	0.2747618931615324	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	12129	0.2402210770674134	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	6837	0.13541029795613038	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	5294	0.1048503901389139	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	6965	50.456913	9
CCGAACT	1285	45.854515	67
TGGCGCG	7705	45.78853	15
CGGCATA	430	42.078667	1
CGCGGTG	8490	41.7193	10
CTACTCG	8735	40.84433	37
CGGTTCA	1420	40.397007	5
TACTCGG	8855	40.377655	38
GCCGGTT	1480	40.159832	3
GTAGTCC	9025	39.577755	27
CGAACTT	1555	39.334717	68
TAGTCCC	9135	38.995255	28
TGTAGTC	9205	38.83449	26
CGTGCCT	9335	38.40803	20
CCTGTAG	9365	38.08501	24
ACTCGGG	9560	37.959034	39
TGCGACA	1595	37.95601	24
GTGGCGC	9385	37.92334	14
GGGGTAG	2390	36.688477	1
AGGATCG	9835	35.18733	59