EGAF00005318612 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318612
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5041781
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	22097	0.43827766418255765	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	10995	0.2180776991305255	No Hit
GACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGAAGTG	6593	0.13076728243452065	No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC	6011	0.11922374256240008	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	5884	0.11670479142192015	No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA	5139	0.10192826701516786	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCGGCA	7390	37.426052	32
GCGGCAC	7890	35.19135	33
TCGCCGG	7370	32.442265	48
CGGCACC	8605	32.316864	34
AGGACCG	1030	31.951582	70
CCCGTCG	7790	30.817537	44
GCACCCC	9115	30.607302	36
CCGTCGC	7820	30.57805	45
TAGTCCG	475	30.573746	6
CGTACGT	320	30.266682	19
CACCCCC	9310	30.232841	37
CCCCCGA	9420	29.633257	19
ACCCGCG	9805	28.34827	25
TAGCGTC	790	28.011833	11
GTAGCGT	780	27.927662	10
GTACGGC	925	27.660862	14
AGTCCGC	10255	27.513601	7
CCCCGAC	10260	27.311268	20
GTTCTCG	2560	27.282686	13
GGCACCC	10320	27.021372	35