EGAF00005318613 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318613
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5041781
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	13505	0.2678616941116641	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	11685	0.23176333918510147	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	6754	0.13396059844725505	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	5262	0.10436788111185315	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	6805	49.027267	9
TGGCGCG	7220	46.44357	15
CCGAACT	1265	41.249706	67
GCCGGTT	1350	40.715805	3
CGGTTCA	1355	40.314835	5
TACTCGG	8345	40.25666	38
CTACTCG	8375	40.224346	37
CGCGGTG	8405	40.0645	10
GTAGTCC	8475	39.656483	27
TAGTCCC	8555	39.29267	28
CGGGTAG	845	39.205887	1
TGTAGTC	8735	38.62768	26
GGGGTAG	2545	38.229694	1
GTGGCGC	8875	37.82178	14
CGTGCCT	8995	37.680676	20
CGAACTT	1435	37.305515	68
CCTGTAG	9140	37.250904	24
ACTCGGG	9210	37.166264	39
CTTAGGC	1505	35.383114	18
TGCGACA	1655	35.123615	24