EGAF00005318615 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318615
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3487577
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	22537	0.6462079546917531	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	22179	0.6359429483564091	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	18998	0.5447334926225285	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	9973	0.2859578440848761	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	9011	0.25837422370889584	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	6427	0.18428266960127332	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	5734	0.1644121405778281	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	4999	0.14333733706811347	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4798	0.13757402345525274	No Hit
GGCGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	4495	0.1288860432328806	No Hit
GGGGACTCTTCTGGTCCGCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	4300	0.12329476883234407	No Hit
GGCGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	3858	0.11062121352446125	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	3808	0.10918755342175956	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	4635	64.11536	4
TCTACGG	4660	63.99307	5
TACGGCC	4680	63.27721	7
CTACGGC	4795	62.2632	6
ACGGCCA	5025	59.00133	8
GCCATAC	5090	57.757736	11
CCTGGTT	7565	57.572933	70
CGGCCAT	5220	56.797256	9
GGGTCTA	3845	56.41509	2
GCGTCTA	955	56.243504	2
CATACCA	5365	55.063324	13
CGTCTAC	1115	54.966267	3
CCATACC	5375	54.832764	12
GCGCGGT	10325	54.628414	9
GGCCATA	5435	54.550453	10
GCCGGTT	1480	53.973106	3
CGCGGTG	10640	53.04349	10
TACCACC	5645	52.454086	15
CCGAACT	1545	51.975437	67
CTGAACG	5690	51.859737	22