EGAF00005318617 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318617
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3472307
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	22312	0.6425699110130527	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	22185	0.6389124003148339	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	19160	0.5517945273848194	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	9949	0.28652420422502967	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	9100	0.26207360121095286	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	6264	0.18039879538301193	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	5826	0.16778470336868256	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	5210	0.1500443365174796	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4760	0.1370846529411138	No Hit
GGCGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	4572	0.1316703851358765	No Hit
GGGGACTCTTCTGGTCCGCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	4397	0.12663050818951205	No Hit
GGCGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	3753	0.10808376102689077	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	3713	0.10693178915343601	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGGCC	4635	64.031425	7
TCTACGG	4650	63.902596	5
GTCTACG	4680	63.419388	4
CTACGGC	4740	62.616615	6
ACGGCCA	5040	59.02096	8
CGGCCAT	5120	58.166	9
CCTGGTT	7750	56.571724	70
GCCATAC	5235	56.42787	11
GGGTCTA	3775	56.382572	2
CCATACC	5365	54.99639	12
GGCCATA	5470	54.44423	10
GCGCGGT	10640	54.32906	9
CATACCA	5440	54.111595	13
GCGTCTA	930	54.068367	2
GCCGGTT	1540	53.660065	3
CGCGGTG	10920	53.030586	10
CCGAACT	1605	52.716534	67
CGTCTAC	1245	52.546635	3
TGGCGCG	11235	51.63568	15
TACCACC	5795	51.21261	15