EGAF00005318621 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318621
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3479591
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	21611	0.6210787417256798	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	21317	0.6126294728317208	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	18571	0.5337121518017491	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	9770	0.28078012617000103	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	8514	0.2446839298066928	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	6090	0.1750205699462954	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	5392	0.15496074107560343	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	4921	0.14142466743936286	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4602	0.1322569232993188	No Hit
GGCGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	4367	0.1255032559861202	No Hit
GGGGACTCTTCTGGTCCGCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	4014	0.11535838551140062	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	3772	0.10840354512929824	No Hit
GGCGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	3658	0.10512729800715083	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	4515	62.78313	5
GTCTACG	4560	62.152824	4
TACGGCC	4585	61.59836	7
CTACGGC	4655	60.672943	6
ACGGCCA	4935	57.229683	8
CCTGGTT	7385	56.344307	70
GGGTCTA	3600	56.1596	2
CGGCCAT	5055	56.07552	9
GCGCGGT	10300	55.709904	9
GCCATAC	5120	55.632706	11
GCCGGTT	1610	54.543148	3
CCATACC	5245	54.30373	12
CATACCA	5280	53.943764	13
CGGTCTA	725	53.68202	2
GGCCATA	5340	53.405224	10
CGCGGTG	10750	53.37786	10
GCGTCTA	885	52.927826	2
CGGTTCA	1680	52.894596	5
CCGAACT	1705	52.29071	67
CGTCTAC	1090	52.12947	3