EGAF00005318632 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318632
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3680907
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	12058	0.32758230512208	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	7785	0.21149678598236793	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	6217	0.16889858939658078	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	5276	0.14333423800166645	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	4025	0.10934804927155183	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCGGCA	3770	36.892727	32
GCGGCAC	3970	35.042267	33
CGTACGT	195	33.731014	19
CGGCACC	4155	33.237873	34
TCGCCGG	3775	33.122494	48
CCCGTCG	3835	33.019543	44
CCGTCGC	3860	32.53931	45
GTTATCG	180	30.764206	6
CCCCCGA	4535	30.534664	19
GCACCCC	4705	29.735395	36
ACCCGCG	4665	29.627665	25
CACCCCC	4885	28.788916	37
CGATCTA	245	28.420086	47
AGGACCG	720	28.130741	70
CCCCGAC	5030	27.67042	20
GGCACCC	5110	27.37308	35
AGTCCGC	5225	27.224117	7
GATAGGC	2490	27.075403	40
GTACGGC	665	27.064722	14
CAGTCCG	5130	26.986147	6