EGAF00005318634 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318634
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3687010
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	12387	0.3359632873249598	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	7662	0.20781066501040138	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	6454	0.1750469892948487	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	5235	0.14198496885009806	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	4057	0.11003496057781237	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCGGCA	3600	37.661385	32
GCGGCAC	3885	34.90285	33
CCGTCGC	3945	33.519836	45
TCGCCGG	3925	33.463455	48
CGGCACC	4075	33.19624	34
CCCGTCG	4065	32.437195	44
CCCCCGA	4645	29.671623	19
GCACCCC	4685	29.406641	36
ACCCGCG	4765	29.012417	25
CACCCCC	4905	28.450724	37
CCCCGAC	5035	27.649187	20
GTTATCG	265	27.433538	6
TTATCGG	230	27.09275	7
GATAGGC	2580	27.071987	40
GGCACCC	5160	26.62876	35
CGCCCTA	1075	26.429268	61
AGTCCGC	5360	26.351406	7
CCCCCGT	5035	26.241476	42
ATGCCCG	1160	26.21641	70
CAGTCCG	5200	25.830738	6