EGAF00005318636 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318636
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3686406
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	12369	0.3355300528482213	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	7803	0.21166957736071393	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	6583	0.17857501317000896	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	5411	0.14678253019336449	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	3972	0.10774722046350835	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCGGCA	3645	36.23986	32
GCGGCAC	3855	34.270832	33
CCGTCGC	3775	33.10146	45
TCGCCGG	3780	33.090664	48
CGGCACC	4060	32.3784	34
CCCGTCG	3955	31.931282	44
CGCGAGA	700	31.16734	25
CCCCCGA	4475	29.850433	19
CGCCCTA	1045	29.535213	61
ATGCCCG	835	29.358335	70
GTACGGC	755	29.324476	14
TACGGCC	785	29.085161	15
GCACCCC	4590	28.957354	36
ACCCGCG	4730	28.40716	25
CACCCCC	4890	27.544296	37
AGTCCGC	5010	27.206915	7
GCGAGAT	820	27.031158	26
CGCGCTT	605	26.874458	14
CCCCGAC	5000	26.856752	20
GTTATCG	220	26.732958	6