EGAF00005318646 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318646
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4761511
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	30074	0.6316062275189536	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	23293	0.48919345140649684	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	11607	0.24376715710622113	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	7894	0.16578770898565603	No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC	6867	0.14421892546294654	No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA	6720	0.141131670177807	No Hit
GGGGGCAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	5461	0.1146904837561018	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCGGCA	9115	37.64333	32
GCGGCAC	9520	36.209385	33
CGGCACC	9705	35.57989	34
CCCGTCG	9330	34.66787	44
TCGCCGG	9370	34.36017	48
CCGTCGC	9405	34.123283	45
GCACCCC	10315	33.51658	36
CCCCCGA	10470	32.964733	19
ACCCGCG	10605	32.45477	25
CACCCCC	10710	32.210403	37
GGCACCC	10770	31.954273	35
GTTCCGT	450	31.327137	1
CCCCGAC	11155	30.95911	20
TAGTCCG	630	30.47113	6
CCCCCGT	10955	29.15674	42
AGGAGGG	15880	28.716599	70
CCCGACC	12405	27.96331	21
CGTCGCC	11870	27.116358	46
CCGCGCG	12740	27.02557	27
AGTCCGC	12880	26.90769	7