EGAF00005318659 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318659
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3879377
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	31243	0.8053612732147455	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	12986	0.3347444705683412	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	11834	0.3050489808028454	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	11120	0.2866439637086058	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	8415	0.21691627289639548	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	7069	0.18221998016691854	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	5888	0.15177694769031214	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	5390	0.138939834927103	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	4147	0.1068986076888119	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	4063	0.10473331156007781	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	6050	64.37162	4
TCTACGG	6110	63.57057	5
TACGGCC	6195	62.434357	7
CTACGGC	6275	61.684464	6
ACGGCCA	6400	60.488274	8
CCTGGTT	9405	58.946106	70
GGGTCTA	4755	58.753166	2
CGGCCAT	6680	57.798294	9
GCCATAC	6710	57.334747	11
GCGTCTA	1085	57.077972	2
CCATACC	6945	55.642437	12
CATACCA	6995	55.241856	13
GGCCATA	7070	54.756004	10
CGGTCTA	840	53.655937	2
CGTCTAC	1425	52.14855	3
GCCGGTT	1070	52.08763	3
TACCACC	7385	52.08217	15
GCGCGGT	6335	51.983307	9
CTGAACG	7535	51.339226	22
TGAACGC	7595	51.08225	23