EGAF00005318661 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318661
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3829888
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	30324	0.7917725009190869	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	13225	0.34531035894522244	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	11675	0.30483920156411887	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	10984	0.2867968984993817	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	8469	0.22112918184552655	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	6673	0.1742348601316801	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	5586	0.1458528291166739	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	5177	0.13517366565288594	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	4047	0.1056688864008556	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	3887	0.10149121854216103	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	5935	64.52176	4
TCTACGG	6015	63.609745	5
TACGGCC	6100	62.497757	7
CTACGGC	6190	61.58907	6
ACGGCCA	6360	60.051018	8
GGGTCTA	4545	59.803276	2
CGGCCAT	6475	58.77115	9
CGTCTAC	1365	57.973156	3
CCTGGTT	9475	57.421238	70
GCCATAC	6660	56.93197	11
GCGTCTA	1215	56.91825	2
CCATACC	6905	54.859955	12
GGCCATA	7035	54.190662	10
CATACCA	7030	54.08096	13
CGGTCTA	765	53.52015	2
CCGAACT	1190	53.15261	67
TACCACC	7240	52.46479	15
GCGCGGT	6320	51.99183	9
GCCGGTT	1215	50.405216	3
TGAACGC	7535	50.39452	23