EGAF00005318674 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318674
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3226621
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	7578	0.23485869583071578	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	4087	0.1266650158168561	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GATTTCG	585	0.0	41.47432	28
TGGCCGT	1035	0.0	39.12738	70
CGAAACG	90	1.1459633E-10	38.56814	37
TTACTCG	240	0.0	37.89492	57
TTTCGCG	85	2.741217E-9	36.835045	45
CGCGGCA	2515	0.0	35.990604	32
CGTTGGA	820	0.0	35.954987	33
ATTTCGT	685	0.0	35.93069	29
TTCGTTG	850	0.0	35.899605	31
GCGGCAC	2600	0.0	34.552578	33
TCGCCGG	2560	0.0	33.608547	48
TCGTTGG	890	0.0	33.51159	32
CCGTCGC	2705	0.0	31.89496	45
CGGCACC	2840	0.0	31.63559	34
CCCGTCG	2755	0.0	31.428669	44
ATGGCCG	1060	0.0	29.94465	69
AACGGGA	740	0.0	29.56992	40
AAACGGG	870	0.0	29.139183	39
ACCCGCG	3170	0.0	29.073982	25
GAAACGG	900	0.0	28.547968	38