EGAF00005318700 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318700
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4076605
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	19612	0.481086590434933	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	10738	0.2634054562558796	No Hit
GACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGAAGTG	6282	0.1540988150679303	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	5812	0.14256961368589793	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	5703	0.1398958201738947	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	5586	0.13702578493623982	No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC	5341	0.13101588208815915	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	5150	0.12633061088822686	No Hit
CGTTTGAATATTTGCTACTACCACCAAGATCTGCACCTGCGGCGGCTCCACCCGGGCCCGCGCCCTAGGCTTCA	4672	0.11460516778054287	No Hit
GCTCAGACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCG	4551	0.11163701168006221	No Hit
TGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCAC	4517	0.11080298434604284	No Hit
AGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCAC	4378	0.10739328436284604	No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA	4269	0.1047194908508428	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCGGCA	6210	35.972607	32
GCGGCAC	6530	34.328827	33
CGGCACC	6790	32.87974	34
TCGCCGG	6410	32.852764	48
CCGTCGC	6315	32.772892	45
CCCGTCG	6465	32.47614	44
AGGACCG	1140	31.798676	70
GCACCCC	7120	31.051966	36
CACCCCC	7610	29.204699	37
CCCCCGA	7550	28.965218	19
GGCACCC	7795	28.435436	35
CGCCCTA	1935	28.364109	61
GTTCCGT	395	27.061634	1
GTTCTCG	2750	27.031301	13
ACCCGCG	8315	26.957726	25
TCGTTTG	2715	26.87901	17
GATAGGC	2280	26.499584	40
GTTATCG	275	26.2814	6
AGTCCGC	8630	26.121155	7
GCATTAG	2285	25.906223	12