EGAF00005318719 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318719
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3525948
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	60

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	11715	0.33225107120127695	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	7174	0.20346301193324462	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	4988	0.141465500909259	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4790	0.1358499898467022	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	4552	0.12910003210484103	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	3950	0.11202660958130976	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	3854	0.1093039375509792	No Hit
GGGGGGCCCTTCCCGTGGATCGCCCCAGCTGCGGCGGGCGTCGCGGCCGC	3738	0.10601404218099643	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CCGAACT	715	51.758404	67
GCGCGGT	3505	50.072773	9
TGGCGCG	3890	45.740135	15
TCTGGTC	3065	44.014904	10
CGGCATA	165	43.96791	1
ACTCTTC	3180	43.39532	5
CGGTTCA	845	42.354767	5
GGGGACT	3710	42.18177	1
CGCGGTG	4235	41.606457	10
GCCGGTT	845	41.54615	3
GGGACTC	3765	41.508183	2
GTACGCA	705	41.465538	65
GGACTCT	3770	40.99136	3
CGGGACT	860	40.97342	1
CGAACTT	965	40.91121	68
GTTGATC	960	40.86747	10
AGTACGC	810	39.98268	64
TGCGTTA	165	39.630188	15
TTCTGGT	3425	39.587234	9
CTGGTCC	3415	39.404205	11