EGAF00005318733 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318733
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4014882
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	17918	0.4462895796190274	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	11430	0.2846908078493963	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	9928	0.24727999477942314	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	9582	0.2386620578139034	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	5508	0.13718958614474847	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	5296	0.13190923170344734	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	5224	0.13011590377998655	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	4021	0.10015238305882963	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	3645	60.513412	5
GTCTACG	3670	60.191647	4
TACGGCC	3700	59.70733	7
CTACGGC	3870	57.08453	6
ACGGCCA	4080	54.400562	8
CGGCCAT	4105	53.563263	9
GCCATAC	4210	51.65254	11
GCGCGGT	6060	50.260452	9
GGGTCTA	3165	49.916477	2
CCATACC	4460	48.75539	12
GCGTCTA	860	48.639416	2
CCTGGTT	6355	48.456924	70
GCCGGTT	1040	48.198788	3
GGCCATA	4650	47.13673	10
TGGCGCG	6455	47.129547	15
CATACCA	4670	46.78504	13
CGGTTCA	1105	45.992134	5
GAACGCG	4740	45.989532	24
CCGAACT	1075	45.86739	67
ATCTCGT	4720	45.85266	35