EGAF00005318735 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318735
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3471239
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	18005	0.5186908766581616	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	10278	0.29609024328200967	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	9990	0.28779349390808295	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	9688	0.2790934303284792	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	8788	0.25316608853495826	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	5403	0.15565047523377099	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4723	0.1360609281008885	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	3590	62.791035	4
TACGGCC	3645	61.750618	7
TCTACGG	3660	61.590115	5
CTACGGC	3780	59.72537	6
ACGGCCA	3940	57.3008	8
CGGCCAT	4050	55.66002	9
GCCATAC	4075	55.05558	11
GGGTCTA	2985	54.315266	2
CCTGGTT	6360	52.390205	70
GCGCGGT	5505	52.320004	9
CCATACC	4370	51.50521	12
CATACCA	4370	51.50521	13
GCGTCTA	705	51.428593	2
GGCCATA	4385	51.329765	10
CCGAACT	955	50.779995	67
TACCACC	4530	49.683887	15
GCCGGTT	940	49.487892	3
TGGCGCG	5935	48.526535	15
TGAACGC	4650	48.467514	23
CGGTTCA	950	48.24895	5