EGAF00005318737 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318737
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3458059
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	18037	0.5215931827652449	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	10280	0.2972765936035215	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	9884	0.28582508279933916	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	9719	0.2810536199642632	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	8593	0.24849200085944168	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	5346	0.15459539585646168	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4690	0.13562521634246263	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3475	0.10048989910235771	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	3700	63.90012	4
TACGGCC	3730	63.292614	7
TCTACGG	3745	63.04093	5
CTACGGC	3835	61.560596	6
ACGGCCA	4110	58.022633	8
GGGTCTA	3125	56.289394	2
CGGCCAT	4225	55.95744	9
GCCATAC	4305	54.75863	11
CCATACC	4410	53.61002	12
CCTGGTT	6300	53.435352	70
GCGTCTA	750	53.387314	2
CATACCA	4490	52.426224	13
GCGCGGT	5065	51.6084	9
CGTCTAC	870	51.520187	3
GGCCATA	4650	51.210945	10
TACCACC	4785	49.3371	15
TGGCGCG	5285	49.265873	15
GAACGCG	4900	48.0517	24
CTGAACG	4940	47.62592	22
CCCGATC	4955	47.31389	31