EGAF00005318760 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318760
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3716109
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	15256	0.410536935272889	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	13685	0.36826153377094156	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	10166	0.2735657108012709	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	8330	0.2241591944692688	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	7305	0.1965765805039626	No Hit
GGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTT	5293	0.14243392753011283	No Hit
GGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCT	4750	0.12782186959532135	No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA	4635	0.1247272348577504	No Hit
GTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACG	4306	0.11587388852156921	No Hit
TGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTCAGG	4185	0.1126177945802989	No Hit
GACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGAAGTG	4151	0.11170285909266925	No Hit
GTGGCTTAGGAGCTTGAAGTTGACCGGGTCCACCCGAAGCTTGTGCGCGT	4149	0.11164903935810279	No Hit
GTGCGCGTGCAGGTCGCTCAGGGCGGACAGCGCGTTGGGCATGTCGTCCA	3817	0.1027149634200719	No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC	3741	0.10066981350654676	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGGCCGT	1970	45.557907	70
GTTCCGT	325	38.31911	1
CGCGGCA	4720	37.454445	32
GCGGCAC	4870	36.308178	33
CGGCACC	4960	35.66333	34
CCCGTCG	4750	35.307602	44
CCGTCGC	4730	35.03167	45
ATGGCCG	2010	34.938923	69
TCGCCGG	5025	32.953632	48
GGCACCC	5605	31.688671	35
GCACCCC	5605	31.63533	36
CCCCCGA	5660	31.28054	19
AGGACCG	645	31.268732	70
CACCCCC	5860	30.565113	37
ACCCGCG	5910	30.099094	25
TCAGGAT	2250	29.356127	70
GATAGGC	4265	29.16217	40
ATAGGCA	4345	28.874887	41
GCATTAG	4410	28.214231	12
CATTAGC	4405	28.167791	13