EGAF00005318767 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318767
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4097358
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	12501	0.3050990418703955	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	10791	0.26336483167934066	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	10671	0.2604361151747053	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	9185	0.2241688424589699	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	8590	0.2096472897901526	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	4646	0.11339014067113491	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4240	0.10348131649711839	No Hit
GGGGGGAAGGCCCGGCGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGT	4106	0.10021091640027549	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	2065	57.02334	4
TCTACGG	2090	56.176975	5
TACGGCC	2115	55.028015	7
CTACGGC	2225	52.768486	6
GCGCGGT	5375	50.65176	9
ACGGCCA	2425	48.418224	8
GCCATAC	2390	48.11645	11
CGGCCAT	2480	47.76032	9
CCGAACT	830	47.405155	67
TGGCGCG	5840	45.909313	15
GAACGCG	2530	45.203384	24
GGGTCTA	1980	44.904705	2
ATCTCGT	2545	44.40075	35
CCATACC	2610	44.19597	12
CATACCA	2630	44.120945	13
CGCGGTG	6195	44.058086	10
TGAACGC	2655	43.574345	23
CCCGATC	2580	43.560707	31
GCCGGTT	955	43.135532	3
GGCCATA	2745	42.649296	10