EGAF00005318769 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318769
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4079292
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	12294	0.3013758269817409	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	10745	0.26340355140058613	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	10562	0.2589174788174026	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	9079	0.22256313105313372	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	8394	0.20577100143848492	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	4593	0.11259306762055768	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4161	0.10200299463730472	No Hit
GGGGGGAAGGCCCGGCGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGT	4152	0.10178236811682027	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	1775	56.6675	4
TACGGCC	1845	54.328102	7
TCTACGG	1860	54.07785	5
CTACGGC	1945	51.713913	6
GCGCGGT	5495	51.036602	9
TGGCGCG	5835	47.82743	15
GCCATAC	2150	46.619946	11
CGCGGTG	6225	45.272156	10
CCGAACT	905	45.047016	67
CGGCCAT	2250	45.00563	9
CATACCA	2305	43.931747	13
GAACGCG	2235	43.470295	24
ACGGCCA	2330	43.16573	8
ATCTCGT	2250	43.00656	35
GGGTCTA	1875	42.30356	2
CTACTCG	6820	41.80547	37
TGAACGC	2340	41.796127	23
CCATACC	2385	41.738514	12
CGGTTCA	955	41.6984	5
TACTCGG	6855	41.66703	38