EGAF00005318771 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318771
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4089962
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	12380	0.30269229885265436	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	10668	0.26083371923748927	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	10354	0.2531563862940536	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	9257	0.22633462120185957	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	8697	0.2126425624492355	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	4777	0.11679815118086671	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4263	0.10423079725435103	No Hit
GGGGGGAAGGCCCGGCGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGT	4181	0.1022258886512882	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	1910	57.51461	4
TCTACGG	1970	55.588634	5
TACGGCC	2005	55.131237	7
CTACGGC	2095	52.760895	6
GCGCGGT	5695	51.839523	9
CCGAACT	960	50.685135	67
GCCATAC	2265	48.044903	11
ACGGCCA	2370	46.930256	8
TGGCGCG	6305	46.55018	15
CGCGGTG	6390	46.147545	10
CGGCCAT	2415	45.771484	9
CGGTTCA	1030	44.661076	5
CCATACC	2440	44.59906	12
CATACCA	2520	44.000565	13
GGGTCTA	1965	43.675617	2
CCCGATC	2485	43.586704	31
ATCTCGT	2470	42.829575	35
GCCGGTT	1090	42.51761	3
GAACGCG	2550	42.42265	24
CGGCATA	295	42.16183	1