EGAF00005318773 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318773
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4086457
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	12299	0.30096976427257155	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	10121	0.24767176064742638	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	9763	0.2389111154234585	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	8641	0.21145456810141403	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	8265	0.2022534435086433	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	4401	0.10769720567229756	No Hit
GGGGGGAAGGCCCGGCGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGT	4162	0.10184861849763743	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	1700	56.944828	4
TACGGCC	1790	53.89519	7
TCTACGG	1830	53.092365	5
CTACGGC	1890	51.588547	6
GCGCGGT	5485	49.00968	9
TGGCGCG	5975	44.813145	15
GCCATAC	2110	44.74525	11
ACGGCCA	2210	43.963364	8
CGGCCAT	2220	43.61068	9
CGCGGTG	6280	43.0241	10
CCGAACT	885	42.796417	67
CGGTTCA	900	42.724037	5
GCGTCTA	470	41.640034	2
CGGGTAG	555	41.158047	1
GCCGGTT	955	40.97745	3
CATACCA	2330	40.959404	13
GTAGTCC	6560	40.876675	27
CTACTCG	6595	40.463474	37
CGTGCCT	6615	40.397686	20
GGGTCTA	1865	40.318035	2