EGAF00005318793 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318793
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3277199
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	61

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	13321	0.4064751636992444	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	11203	0.341846802711706	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	8762	0.2673624641042549	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	8443	0.25762854193474366	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	6188	0.18881978177095746	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	5016	0.15305753480334883	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4594	0.1401806847860017	No Hit
GGGGGGAAGGCCCGGCGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGT	3431	0.10469306258179623	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	1625	59.85932	5
TACGGCC	1635	59.490486	7
CTACGGC	1745	55.740368	6
GTCTACG	1745	55.54455	4
GCGCGGT	5030	53.879826	9
CCGAACT	990	52.889164	67
TGGCGCG	5270	51.425312	15
ACGGCCA	1900	51.37217	8
CGCGGTG	5335	50.92929	10
CGGCCAT	1910	50.921993	9
GCCATAC	1920	50.296227	11
GCCGGTT	1080	49.6806	3
CGGTTCA	1090	49.22481	5
CGAACTT	1105	48.765835	68
CATACCA	2035	47.283123	13
GAACGCG	2055	46.709442	24
GGGTCTA	1625	46.669037	2
GGCCATA	2140	45.610806	10
ATCTCGT	2140	45.100212	35
TGAACGC	2130	45.061302	23