EGAF00005318795 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318795
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3284400
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	61

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	12884	0.3922786505906711	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	10997	0.3348252344416027	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	8963	0.2728961149677262	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	8465	0.25773352819388623	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	6319	0.1923943490439654	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	5068	0.15430520034100595	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4677	0.14240043843624406	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	3348	0.1019364267446109	No Hit
GGGGGGAAGGCCCGGCGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGT	3325	0.10123614663256607	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	1680	62.428337	5
TACGGCC	1730	60.22298	7
GTCTACG	1790	58.97871	4
CTACGGC	1850	56.689095	6
GCCATAC	1925	54.302277	11
ACGGCCA	1945	53.7439	8
CCGAACT	965	53.515327	67
GCGCGGT	4930	53.078266	9
CGCGGTG	5150	50.945263	10
GCGTCTA	415	50.87879	2
CATACCA	2095	50.55676	13
CCATACC	2075	50.54362	12
CGGCCAT	2085	49.969185	9
GCCGGTT	1025	49.641914	3
CGGTTCA	1040	49.59083	5
TGGCGCG	5295	49.28718	15
GGGTCTA	1655	48.104412	2
GGCCATA	2220	47.398266	10
CGGCATA	185	47.090996	1
CCGGTTC	1100	46.571205	4