EGAF00005318797 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318797
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3287305
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	61

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	12528	0.3811024532253624	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	10737	0.326620134122024	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	8610	0.2619166764264344	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	8088	0.24603740754204434	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	6088	0.185197296873883	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	4790	0.1457120650502463	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4516	0.13737696988870823	No Hit
GGGGGGAAGGCCCGGCGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGT	3297	0.10029492243646393	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	1805	59.62012	5
TACGGCC	1820	59.509	7
CTACGGC	1870	58.10289	6
GTCTACG	1940	55.99957	4
GCGCGGT	5300	53.927944	9
GCCATAC	2060	51.736042	11
CGGCCAT	2105	50.958813	9
ACGGCCA	2130	50.685608	8
GGGTCTA	1680	50.678238	2
CGCGGTG	5655	50.664925	10
CCGAACT	905	50.05443	67
TGGCGCG	5690	49.6798	15
CCATACC	2210	48.220142	12
CGGTTCA	955	47.82778	5
GGCCATA	2285	47.550285	10
CGGATAT	220	45.992928	1
CCGGTTC	995	45.899464	4
CATACCA	2315	45.883587	13
GCCGGTT	1020	45.113678	3
GAACGCG	2365	45.109974	24