EGAF00005318799 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318799
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4134825
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	18811	0.4549406564969497	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	14840	0.35890273469856643	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	12783	0.3091545591409552	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	8259	0.19974243166276687	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	7329	0.17725054869311277	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	5559	0.13444341658957754	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	4721	0.11417653709649138	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	3965	61.029716	4
TCTACGG	3955	61.009457	5
TACGGCC	3985	60.11632	7
CTACGGC	4070	59.370422	6
ACGGCCA	4365	54.961906	8
CGGCCAT	4430	54.156124	9
GGGTCTA	3435	53.875824	2
GCCATAC	4400	53.589115	11
GCGCGGT	7605	52.83482	9
CCGAACT	1320	51.528927	67
CCATACC	4625	50.982693	12
CGCGGTG	7935	50.682877	10
CATACCA	4660	50.673244	13
GGCCATA	4745	50.63552	10
CCTGGTT	6535	50.27505	70
CGGTTCA	1435	49.073242	5
GCGTCTA	760	49.06435	2
TGGCGCG	8310	48.315586	15
GCCGGTT	1455	47.692722	3
CTGAACG	5030	47.39834	22