EGAF00005318800 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318800
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4158732
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

$Duplication level graph$

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	19745	0.4747841409352659	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	17975	0.4322230910767994	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	15170	0.3647746476570262	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	8956	0.21535410312566428	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	8305	0.19970029326246558	No Hit
GGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTT	7613	0.1830606059731668	No Hit
GTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACG	6532	0.15706710603135765	No Hit
GACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGAAGTG	6387	0.15358046635368666	No Hit
TGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTCAGG	6030	0.1449961190093519	No Hit
GGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCT	5594	0.13451215418545845	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	5324	0.12801979064772628	No Hit
GTGGCTTAGGAGCTTGAAGTTGACCGGGTCCACCCGAAGCTTGTGCGCGT	4825	0.116020940998362	No Hit
GTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCCTGCACTGGTGGGGTGAATTCTTTGCC	4692	0.1128228508112569	No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA	4528	0.10887934110685661	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGGCCGT	2075	0.0	42.673275	70
CGCGGCA	6020	0.0	37.340233	32
AGGACCG	740	0.0	36.713306	70
GCGGCAC	6235	0.0	36.231537	33
CGGCACC	6400	0.0	35.30938	34
ACGATCG	50	1.8522983E-4	34.531487	6
CCGTCGC	6240	0.0	34.36998	45
TCGCCGG	6260	0.0	34.1534	48
CCCGTCG	6445	0.0	33.42179	44
GCACCCC	6940	0.0	32.732346	36
CTTACCC	1630	0.0	32.71747	70
CCCCCGA	7065	0.0	32.517185	19
GTTCCGT	440	0.0	32.20691	1
ATGGCCG	2205	0.0	31.902306	69
CACCCCC	7280	0.0	31.405954	37
GGCACCC	7210	0.0	31.349398	35
TCAGGAT	2825	0.0	31.165998	70
ACCCGCG	7390	0.0	30.694113	25
TAGTCCG	365	0.0	30.27418	6
GTCCGTT	285	0.0	29.088596	2