EGAF00005318803 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318803
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4284106
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	19693	0.4596758343514376	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	16121	0.37629787871728665	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	13581	0.31700896289680974	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	8887	0.20744117909314103	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	7923	0.18493940159277103	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	5551	0.12957195736986898	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	4860	0.11344257121555816	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	4215	62.42114	5
GTCTACG	4255	61.75247	4
TACGGCC	4270	61.38529	7
CTACGGC	4335	60.61782	6
ACGGCCA	4645	56.80127	8
CGGCCAT	4645	56.355186	9
GCCATAC	4745	55.23965	11
CCTGGTT	6785	54.138943	70
GGGTCTA	3800	53.971813	2
GCGCGGT	7885	52.86351	9
CCATACC	5015	52.26502	12
CATACCA	5055	51.986862	13
GCCGGTT	1335	50.691944	3
GGCCATA	5160	50.596737	10
CGCGGTG	8305	50.190098	10
GAACGCG	5210	50.166264	24
CTGAACG	5260	50.071453	22
TACCACC	5220	50.071377	15
GCGTCTA	870	50.005234	2
TGAACGC	5290	49.729717	23