EGAF00005318805 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318805
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4220347
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	19698	0.46673887241973233	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	15769	0.37364226211730933	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	13198	0.3127231007308167	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	8723	0.20668916560652476	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	7713	0.1827574841594779	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	5566	0.13188489003392376	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	4717	0.11176806077794077	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	4060	63.779697	5
TACGGCC	4150	62.063744	7
GTCTACG	4205	61.90662	4
CTACGGC	4240	60.82778	6
ACGGCCA	4485	57.274025	8
CGGCCAT	4700	54.57929	9
GGGTCTA	3360	54.04783	2
CCTGGTT	6595	53.9314	70
GCCATAC	4780	53.88252	11
GCGCGGT	8200	52.924698	9
CATACCA	4905	52.64827	13
GCGTCTA	1030	52.290062	2
CCATACC	4970	51.751312	12
TACCACC	5075	50.884678	15
GGCCATA	5035	50.87933	10
GAACGCG	5145	50.384533	24
CGCGGTG	8725	49.97754	10
TGAACGC	5215	49.76446	23
CTGAACG	5255	49.577057	22
CCCGATC	5265	48.856667	31