EGAF00005318809 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318809
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3360411
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	23674	0.7044971582345135	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	10553	0.314038967257279	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	8914	0.2652651714328991	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	6282	0.18694141877288226	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	6012	0.17890668730699907	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	5746	0.1709909888998697	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	4747	0.14126248247610187	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4305	0.1281093294838042	No Hit
GGCCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	3705	0.11025437067073045	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	3422	0.10183278176389733	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	4660	63.711693	5
GTCTACG	4675	63.43351	4
TACGGCC	4745	62.57039	7
CTACGGC	4820	61.596783	6
CCTGGTT	6985	60.019577	70
ACGGCCA	4990	59.636505	8
GCGTCTA	970	58.667587	2
CGGCCAT	5125	57.998306	9
GCCATAC	5150	57.64637	11
GGGTCTA	3715	57.281235	2
CCATACC	5255	56.560154	12
CATACCA	5330	55.69959	13
GGCCATA	5365	55.400486	10
CGTCTAC	1175	54.878933	3
TACCACC	5485	53.876534	15
CCGAACT	840	53.654964	67
CGGTCTA	555	53.44308	2
GAACGCG	5535	53.15118	24
CTGAACG	5625	52.653374	22
TGAACGC	5620	52.582863	23