EGAF00005318811 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318811
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3454591
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	23982	0.6942066369072345	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	10384	0.30058551070155626	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	9010	0.2608123508687425	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	6538	0.18925539955381115	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	6325	0.18308969137012168	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	5671	0.16415836201738498	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	4822	0.13958237024296075	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4413	0.12774305265080585	No Hit
GGCCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	3674	0.10635122942194894	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	4660	63.713245	5
GTCTACG	4665	63.644955	4
TACGGCC	4685	62.94349	7
CTACGGC	4800	61.571148	6
CCTGGTT	6855	60.0675	70
ACGGCCA	5045	58.58871	8
GGGTCTA	3605	58.5408	2
GCCATAC	5030	58.352016	11
CGGCCAT	5060	58.278706	9
GGCCATA	5160	57.216114	10
GCGTCTA	965	57.174862	2
CCATACC	5250	55.972485	12
CATACCA	5320	55.429695	13
TACCACC	5450	54.034054	15
CGTCTAC	1110	53.744694	3
CGGTCTA	635	53.21877	2
CTGAACG	5625	52.272804	22
GAACGCG	5640	52.209354	24
TGAACGC	5655	52.064823	23
GCGCGGT	5290	51.506935	9