EGAF00005318813 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318813
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3413135
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	23168	0.6787894413786738	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	10307	0.30198043733986496	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	8807	0.258032571228504	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	6270	0.18370208034548882	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	6108	0.17895571080546185	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	5636	0.16512678226908692	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	4594	0.13459766461039482	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4152	0.12164769339624713	No Hit
GGCCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	3620	0.10606085021541778	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGGCC	4340	63.270924	7
GTCTACG	4355	63.208645	4
TCTACGG	4375	63.000385	5
CTACGGC	4460	61.64592	6
ACGGCCA	4635	59.020695	8
CCTGGTT	6655	57.720257	70
CGGCCAT	4750	57.66271	9
GCCATAC	4770	57.277138	11
GGGTCTA	3375	55.908173	2
GGCCATA	4970	55.24986	10
CGGTCTA	615	54.40745	2
GCGTCTA	960	54.25846	2
CCATACC	5050	54.032276	12
CGTCTAC	1150	53.692913	3
CATACCA	5095	53.622757	13
GAACGCG	5225	52.151733	24
GCGCGGT	5105	52.03111	9
TACCACC	5300	51.93919	15
TGAACGC	5290	51.76675	23
CTGAACG	5300	51.597862	22